Application Notes

Optimization of membrane proteins for cryo_EM

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3 A P P L I C A T I O N N O T E The Prometheus Panta is an instrument that utilizes label-free methods to simultaneously monitor the conformational and colloidal stability characteristics of proteins along a thermal denaturation gradient. This instrument uses very little material, requiring only 10 µL per sample (≥100µg /ml concentrated). This small volume especially allows screening of different copolymers alongside many different membrane proteins using miniaturized expres- sion and purification protocols. Isothermal DLS analysis provides information on the size (hydrodynamic radius, r H ) and the polydispersity index (PDI) of the membrane proteins stabilized in the nanodiscs, allowing the triage of copolymer nanodiscs with aberrant sizes. Next, nanoDSF, backreflection, and DLS data was collected along a temperature ramp on the same 10 µL samples to review the thermal stability of the candidates. Parameters such as melting temperature of the protein (T m ), the onsets of aggregation (T onset Turbidity) and sizing increase (T onset r H ) confirm the folding of the protein as well as the thermal stability of the nanodiscs.

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