Application Notes

nanoDSF: Label-free thermal unfolding assay of G protein-coupled receptors for compound screening and buffer composition optimization

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2 APPLICATION NOTE ©2017 NanoTemper Technologies, Inc. South San Francisco, CA, USA. All Rights Reserved. Biophysical results using samples of GPCRs, in general, are diff icult to obtain because of the receptors' fl exibility and their conformational heterogeneity. For biophysical and structural characterization studies, GPCRs need to be extracted stability for biophysical assays by screening buff er conditions. Introduction G protein-coupled receptors (GPCRs) are implicated in numerous diseases and are the target of many drug treatments. Obtaining suff icient quantities of purifi ed receptors for biophysical and structural characterization has been a challenge, and is still proving to be diff icult. Until recently, of the almost thousand proteins in this family, only a few crystallographic structures have been solved (Figure 1) [1]. Figure 1: Structure of the human A2AR bound with the potential Parkinson's drug ZM241385 (blue). Several lipid molecules are seen in the X-ray structure (red). Four native disulfi de bonds are also indicated (yellow). The seven transmembrane helices are colored in brown; the extracellular and intracellular loops are shown in pink and turquoise, respectively. Figure 2: Use of nanoDSF in early lead discovery, screening assays and structural biology. A. Biophysical assays used in the early lead discovery process. B. Typical construct optimization cycle diagram of a GPCR target for structural biology. The nanoDSF assay can be used for various points in in vitro screening of compounds and construct selection and optimization for biochemical and biophysical assays such as X-ray crystallography (examples of assay possibilities are marked as *). from a lipid environment using surfactants and purifi ed to homogeneity in the presence of stabilizing surfactants and a suitable buff er environment. Receptors can also be rapidly denatured upon concentration in absence of a high aff inity ligand. Typically, receptor variants, surfactants, buff er compositions (pH, additives, lipids) and ligands are screened to optimize receptor stability for biophysical and structural analysis as well as lead discovery (Figure 2). Here we use the label-free diff erential scanning fl uorimetry (nanoDSF) of the Prometheus NT.48 to determine the thermal stability of two GPCRs in the presence of a variety of diff erent ligands and in a broad range of buff er systems.

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