Application Notes

Application Note-Cube-MOX-Affinity Measurements Without Disrupting Protein Conformation_002

Issue link: https://resources.nanotempertech.com/i/1531548

Contents of this Issue

Navigation

Page 9 of 16

1 0 A P P L I C A T I O N N O T E NTCP and LHBsAg Gaining more insights into the NTCP-LHBsAg interaction is critical for developing new therapeutic strategies, as it could lead to targeted treatments that prevent HBV entry into hepatocytes and re- duce the viral load in infected individuals. Understanding this interaction in detail could also provide valuable information for combating HBV-associated conditions such as cirrhosis and liver cancer (22). This is the first study in which both proteins were purified as unaltered full-length versions to keep the approach as native as possible. As illustrated in Figure 8A, the copolymer nanodisc-stabilized NTCP and LHBsAg had a hydrodynam- ic radius (rH) of 6.57 ± 0.22 nm and 5.80 ± 0.29 nm respectively. The polydispersity index (PDI) was demonstrated to be 0.20 ± 0.04 and 0.16 ± 0.04 for NTCP and LHBsAg. The sizing information con- firmed the anticipated formation of the nanodiscs, and the PDI indicated that the purified samples were monodisperse for further biophysical analyses. Both samples remained thermal stable up to approximately 53 °C (NTCP) and 79°C (LHBsAg). The Cy5 analogue-labeled NTCP nanodisc was maintained at a constant concentration of 20 nM, while the concentration of non-labeled L-HBsAg nanodisc was varied between 0.2 nM and 9.3 µM (Figure 3B cyan). A decrease of nanodiscs with L-HBsAg inside was complemented with empty nano- discs to preserve its constant molarity while only L-HBsAg had changing concentrations. The Kd was determined by analyzing the TRIC signal using 670 nm at 2.5 s yielding a Kd of 967 nM. The black data shows the negative control using the same assay settings only with a dilution series of a non-specific membrane protein. Figure 7: Western blot and SDS PAGE of NTCP sol- ubilized with Native MP TM . NTCP is a protein with a theoretical size of 39,3 kDa and was detected at an apparent height of ~ 48 kDa (marked with arrows). Detection of proteins in SDS Page via specific pri- mar y Rho1D4 antibody and secondar y HRP anti- body.

Articles in this issue

view archives of Application Notes - Application Note-Cube-MOX-Affinity Measurements Without Disrupting Protein Conformation_002