Technical Notes

Measure binding affinities for any type of interaction — examine a label-free or labeled target molecule at anytime

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3 TECHNICAL NOTE ©2020 NanoTemper Technologies, Inc. South San Francisco, CA, USA. All Rights Reserved. detector of the Monolith Pico instrument at 10% LED and medium MST power. Data was analyzed a er 5 seconds MST on-time using the MO.Affinity Analysis 3 so ware. The resulting dose-response curves were fitted to a one-site binding model to extract K d values. Fraction-bound results are shown in Figure 2, together with obtained K d s, which are in good agreement with published values 1,2 . Using the RED detector not only allowed precise quantification of the lower nM K d of Acetazolamide, but also required much less protein sample compared to the protein concentrations needed for label-free experiments. 0.01 0.1 1 1 0 1 00 1 0 3 1 0 4 1 0 5 1 0 6 Ligand Concentration [nM] 0.0 0.5 1.0 Fraction Bound [-] Figure 2: Precise K d determination of a broad range of affinities using the RED detection of Monolith Pico. Dose-response curves for Acetazolamide (dark blue), Furosemides (light blue), and Benzenesulfonamide (purple) titrated with labeled CAII at medium MST power. An MST on-time of 5 seconds was used for analysis, and K d values of 13 ± 2 nM, 411 ± 80 nM and 2 ± 0.4 µM, respectively were obtained (n = 3 independent measurements, error bars represent the standard deviation). Conclusions The combination of LabelFree and RED detectors in the Monolith Pico instrument provides scientists with the ability to characterize almost any type of interaction. Where binding affinity quantification under native conditions is preferred, label-free MST can be performed. In other circumstances, measuring a labeled target is desired and the RED channel is useful for measuring any interaction, even the most challenging ones — those involving ternary complexes or interactions in cell lysate or serum — while using very little sample. Having both detectors in one instrument provides the highest versatility and flexibility of all Monolith instruments, enabling scientists to freely choose the most appropriate approach for their project.

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