Application Notes

Purification-free labeling in whole cell lysate and binding characterization by MST

Issue link: https://resources.nanotempertech.com/i/1050599

Contents of this Issue

Navigation

Page 2 of 5

3 APPLICATION NOTE ©2017 NanoTemper Technologies, Inc. South San Francisco, CA, USA. All Rights Reserved. lysate expressing mNeonGreen-6xHis fusion protein but lacking p38α. First, the His-tag was labeled with RED-tris-NTA in cell lysate and the ligand SB203580 was titrated. As shown in Figure 2 (grey), binding could not be detected, demonstrating that the changes in the MST signal of RED-tris-NTA-labelled p38α are a result of its specifi c interaction with SB203580. In addition, orthogonal MST experiments were carried out in which the mNeonGreen fl uorescence of the protein was detected using the Monolith NT.115 system's blue detection channel. As shown in Figure 3, clear binding was detected and the aff inity of SB203508 for p38α-mNeonGreen-6xHis was determined to be 82 nM, which strongly correlates with the previous results. Interestingly, comparison of the results with the fi rst experiment, where the RED- tris-NTA labeled protein was tested (Figure 2), show that the labeling with RED-tris-NTA resulted in a larger binding amplitude and a highly-improved signal-to- noise ratio. Figure 2. MST traces and dose-response curve for the binding interaction between RED-tris-NTA labeled p38α and SB203580 in whole cell lysate. The concentration of RED-tris-NTA labeled p38α-mNeonGreen-6xHis (red) or mNeonGreen-6xHis (grey) in lysate is constant, while the concentration of SB203580 varies between 26.5 µM and 1.62 nM. A K d of 247 nM was determined for p38α-mNeonGreen-6xHis. The negative control employing mNeonGreen-6xHis did not yield a binding curve. Concentrations on the x-axis are plotted in µM. RED-tris-NTA fl uorescence was used for detection. The corresponding MST time traces are shown on the right. n = 3

Articles in this issue

view archives of Application Notes - Purification-free labeling in whole cell lysate and binding characterization by MST